Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Gm27867-201ENSMUST00000184778 125 ntBASIC18.03■□□□□ 0.48
Smc3Q9CW03 Gm18622-201ENSMUST00000219361 595 ntBASIC18.03■□□□□ 0.48
Smc3Q9CW03 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc3Q9CW03 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.02■□□□□ 0.48
Smc3Q9CW03 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Gm27704-201ENSMUST00000185094 107 ntBASIC18.02■□□□□ 0.48
Smc3Q9CW03 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.02■□□□□ 0.48
Smc3Q9CW03 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.02■□□□□ 0.48
Smc3Q9CW03 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc3Q9CW03 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc3Q9CW03 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.02■□□□□ 0.47
Smc3Q9CW03 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.02■□□□□ 0.47
Smc3Q9CW03 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Smc3Q9CW03 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc3Q9CW03 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Smc3Q9CW03 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc3Q9CW03 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc3Q9CW03 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Gm37736-201ENSMUST00000193564 2802 ntBASIC18■□□□□ 0.47
Smc3Q9CW03 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18■□□□□ 0.47
Smc3Q9CW03 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Smc3Q9CW03 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Smc3Q9CW03 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18■□□□□ 0.47
Smc3Q9CW03 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18■□□□□ 0.47
Smc3Q9CW03 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Smc3Q9CW03 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Smc3Q9CW03 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18■□□□□ 0.47
Smc3Q9CW03 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18■□□□□ 0.47
Smc3Q9CW03 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Smc3Q9CW03 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Smc3Q9CW03 Gm4459-201ENSMUST00000118750 468 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms