Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.56□□□□□ -0.4
Rer1Q9CQU3 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rer1Q9CQU3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Gm27867-201ENSMUST00000184778 125 ntBASIC12.55□□□□□ -0.4
Rer1Q9CQU3 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rer1Q9CQU3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Gm19164-201ENSMUST00000210667 640 ntBASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rer1Q9CQU3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rer1Q9CQU3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms