Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RTRAFQ9CQE8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Gm7791-201ENSMUST00000219066 539 ntBASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.49□□□□□ -0.41
RTRAFQ9CQE8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Gm37179-201ENSMUST00000194862 823 ntBASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RTRAFQ9CQE8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RTRAFQ9CQE8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.46□□□□□ -0.41
RTRAFQ9CQE8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms