Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb1Q9CQ70 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Gm12895-201ENSMUST00000122214 226 ntBASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb1Q9CQ70 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
H2afb1Q9CQ70 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
H2afb1Q9CQ70 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms