Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.03■□□□□ -0
Trim8Q99PJ2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim8Q99PJ2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Trim8Q99PJ2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.02■□□□□ -0
Trim8Q99PJ2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim8Q99PJ2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim8Q99PJ2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim8Q99PJ2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim8Q99PJ2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim8Q99PJ2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim8Q99PJ2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim8Q99PJ2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.02□□□□□ -0.01
Trim8Q99PJ2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.02□□□□□ -0.01
Trim8Q99PJ2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim8Q99PJ2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim8Q99PJ2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim8Q99PJ2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim8Q99PJ2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim8Q99PJ2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trim8Q99PJ2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Gm21362-201ENSMUST00000194272 928 ntBASIC15□□□□□ -0.01
Trim8Q99PJ2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim8Q99PJ2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim8Q99PJ2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim8Q99PJ2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trim8Q99PJ2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trim8Q99PJ2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15□□□□□ -0.01
Trim8Q99PJ2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim8Q99PJ2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim8Q99PJ2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim8Q99PJ2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim8Q99PJ2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim8Q99PJ2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim8Q99PJ2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim8Q99PJ2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim8Q99PJ2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms