Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Gm12091-201ENSMUST00000146791 830 ntBASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Gm37917-201ENSMUST00000194711 392 ntBASIC15.41■□□□□ 0.06
Cdh23Q99PF4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdh23Q99PF4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Gm3436-201ENSMUST00000179930 840 ntBASIC15.39■□□□□ 0.05
Cdh23Q99PF4 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Gm28760-201ENSMUST00000185995 736 ntBASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Dupd1-202ENSMUST00000224735 548 ntBASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh23Q99PF4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms