Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lims1Q99JW4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.97□□□□□ -0.17
Lims1Q99JW4 Sybu-209ENSMUST00000228639 4113 ntBASIC13.97□□□□□ -0.17
Lims1Q99JW4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Gm8344-201ENSMUST00000119813 856 ntBASIC13.97□□□□□ -0.17
Lims1Q99JW4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Lims1Q99JW4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lims1Q99JW4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lims1Q99JW4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Celf4-206ENSMUST00000224553 1729 ntBASIC13.96□□□□□ -0.17
Lims1Q99JW4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Gm15165-201ENSMUST00000118140 502 ntBASIC13.96□□□□□ -0.17
Lims1Q99JW4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.96□□□□□ -0.17
Lims1Q99JW4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.96□□□□□ -0.17
Lims1Q99JW4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lims1Q99JW4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lims1Q99JW4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lims1Q99JW4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lims1Q99JW4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.95□□□□□ -0.18
Lims1Q99JW4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.95□□□□□ -0.18
Lims1Q99JW4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.95□□□□□ -0.18
Lims1Q99JW4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.95□□□□□ -0.18
Lims1Q99JW4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lims1Q99JW4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lims1Q99JW4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lims1Q99JW4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms