Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.5■□□□□ 0.39
Trex1Q91XB0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trex1Q91XB0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Gm16026-204ENSMUST00000162652 683 ntBASIC17.49■□□□□ 0.39
Trex1Q91XB0 Gm24158-201ENSMUST00000175263 71 ntBASIC17.49■□□□□ 0.39
Trex1Q91XB0 Gm10253-201ENSMUST00000194270 940 ntBASIC17.49■□□□□ 0.39
Trex1Q91XB0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.49■□□□□ 0.39
Trex1Q91XB0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trex1Q91XB0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 App-207ENSMUST00000227737 2827 ntBASIC17.48■□□□□ 0.39
Trex1Q91XB0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Gm25287-201ENSMUST00000103846 110 ntBASIC17.48■□□□□ 0.39
Trex1Q91XB0 Gm22918-201ENSMUST00000103855 110 ntBASIC17.48■□□□□ 0.39
Trex1Q91XB0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.48■□□□□ 0.39
Trex1Q91XB0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trex1Q91XB0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trex1Q91XB0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.48■□□□□ 0.39
Trex1Q91XB0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trex1Q91XB0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Gm5779-201ENSMUST00000218467 910 ntBASIC17.46■□□□□ 0.39
Trex1Q91XB0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trex1Q91XB0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms