Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb11Q91UZ8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb11Q91UZ8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Gm15590-201ENSMUST00000078419 552 ntBASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb11Q91UZ8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdhb11Q91UZ8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Gm37444-201ENSMUST00000193605 439 ntBASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Gm45167-201ENSMUST00000208007 322 ntBASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb11Q91UZ8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms