Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 BC037039-201ENSMUST00000192003 2205 ntBASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Gm18669-201ENSMUST00000216049 778 ntBASIC12.85□□□□□ -0.35
H1fooQ8VIK3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H1fooQ8VIK3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.84□□□□□ -0.35
H1fooQ8VIK3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.84□□□□□ -0.35
H1fooQ8VIK3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
H1fooQ8VIK3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
H1fooQ8VIK3 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
H1fooQ8VIK3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Gm8097-201ENSMUST00000117903 829 ntBASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Gm14722-201ENSMUST00000118943 689 ntBASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H1fooQ8VIK3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms