Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm7889-201ENSMUST00000185591 958 ntBASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup35Q8R4R6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Gm14722-201ENSMUST00000118943 689 ntBASIC12.5□□□□□ -0.41
Nup35Q8R4R6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nup35Q8R4R6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Gm25406-201ENSMUST00000157599 105 ntBASIC12.49□□□□□ -0.41
Nup35Q8R4R6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nup35Q8R4R6 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nup35Q8R4R6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms