Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp7Q8R1T1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp7Q8R1T1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp7Q8R1T1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp7Q8R1T1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp7Q8R1T1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp7Q8R1T1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Chmp7Q8R1T1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp7Q8R1T1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Gm16026-204ENSMUST00000162652 683 ntBASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Gm5779-201ENSMUST00000218467 910 ntBASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp7Q8R1T1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Gm11543-201ENSMUST00000120758 370 ntBASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chmp7Q8R1T1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.49■□□□□ 0.71
Chmp7Q8R1T1 Gm18737-201ENSMUST00000173594 937 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms