Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Clrn1Q8K445 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.47□□□□□ -0.09
Clrn1Q8K445 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Gm13884-201ENSMUST00000118103 829 ntBASIC14.47□□□□□ -0.09
Clrn1Q8K445 Gm15173-201ENSMUST00000122049 433 ntBASIC14.47□□□□□ -0.09
Clrn1Q8K445 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.47□□□□□ -0.09
Clrn1Q8K445 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Clrn1Q8K445 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.46□□□□□ -0.09
Clrn1Q8K445 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.46□□□□□ -0.09
Clrn1Q8K445 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.46□□□□□ -0.09
Clrn1Q8K445 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn1Q8K445 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Clrn1Q8K445 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn1Q8K445 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Clrn1Q8K445 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Clrn1Q8K445 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Gm7862-201ENSMUST00000121461 292 ntBASIC14.45□□□□□ -0.1
Clrn1Q8K445 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Asic1-205ENSMUST00000228185 1818 ntBASIC14.45□□□□□ -0.1
Clrn1Q8K445 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn1Q8K445 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn1Q8K445 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms