Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.07■□□□□ 0.16
Trim61Q8JZK6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trim61Q8JZK6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Gm7063-201ENSMUST00000186840 981 ntBASIC16.06■□□□□ 0.16
Trim61Q8JZK6 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trim61Q8JZK6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Gm12008-201ENSMUST00000117791 755 ntBASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Gm13365-201ENSMUST00000121188 973 ntBASIC16.05■□□□□ 0.16
Trim61Q8JZK6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Gm8318-201ENSMUST00000182954 872 ntBASIC16.05■□□□□ 0.16
Trim61Q8JZK6 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim61Q8JZK6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gm13616-201ENSMUST00000120600 222 ntBASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gm11745-201ENSMUST00000121669 448 ntBASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Mir6956-201ENSMUST00000183598 62 ntBASIC16.04■□□□□ 0.16
Trim61Q8JZK6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gm44335-201ENSMUST00000196879 141 ntBASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gm44297-201ENSMUST00000198304 141 ntBASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gm44346-201ENSMUST00000198851 141 ntBASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Gm5312-201ENSMUST00000203728 547 ntBASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim61Q8JZK6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms