Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Uba3Q8C878 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Uba3Q8C878 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Uba3Q8C878 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.13■□□□□ 0.17
Uba3Q8C878 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.13■□□□□ 0.17
Uba3Q8C878 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Uba3Q8C878 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.13■□□□□ 0.17
Uba3Q8C878 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Uba3Q8C878 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Uba3Q8C878 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Uba3Q8C878 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.12■□□□□ 0.17
Uba3Q8C878 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Uba3Q8C878 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.12■□□□□ 0.17
Uba3Q8C878 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Uba3Q8C878 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.11■□□□□ 0.17
Uba3Q8C878 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Uba3Q8C878 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Gm10499-201ENSMUST00000174094 934 ntBASIC16.11■□□□□ 0.17
Uba3Q8C878 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.11■□□□□ 0.17
Uba3Q8C878 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Uba3Q8C878 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Uba3Q8C878 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.11■□□□□ 0.17
Uba3Q8C878 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Uba3Q8C878 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Uba3Q8C878 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.1■□□□□ 0.17
Uba3Q8C878 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.1■□□□□ 0.17
Uba3Q8C878 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.1■□□□□ 0.17
Uba3Q8C878 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Gm7787-201ENSMUST00000216858 688 ntBASIC16.1■□□□□ 0.17
Uba3Q8C878 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.1■□□□□ 0.17
Uba3Q8C878 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Uba3Q8C878 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms