Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp44Q8C2S0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp44Q8C2S0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp44Q8C2S0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp44Q8C2S0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Usp44Q8C2S0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Gm13597-201ENSMUST00000121239 375 ntBASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Gm1401-201ENSMUST00000122048 772 ntBASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Psmb5-202ENSMUST00000227257 622 ntBASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp44Q8C2S0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp44Q8C2S0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Usp44Q8C2S0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms