Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Gm13365-201ENSMUST00000121188 973 ntBASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Gm11745-201ENSMUST00000121669 448 ntBASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Gm20553-201ENSMUST00000204205 844 ntBASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Gm8396-201ENSMUST00000057361 823 ntBASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh3rf2Q8BZT2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Rpph1-201ENSMUST00000175096 319 ntBASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh3rf2Q8BZT2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gm2272-201ENSMUST00000194903 582 ntBASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gm10154-201ENSMUST00000084445 354 ntBASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh3rf2Q8BZT2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Gm44335-201ENSMUST00000196879 141 ntBASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Gm44297-201ENSMUST00000198304 141 ntBASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Gm44346-201ENSMUST00000198851 141 ntBASIC15.46■□□□□ 0.07
Sh3rf2Q8BZT2 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms