Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smg1Q8BKX6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smg1Q8BKX6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gm45841-201ENSMUST00000207700 164 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gm15806-201ENSMUST00000120696 955 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gm15483-201ENSMUST00000120338 456 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Gm44344-201ENSMUST00000200287 129 ntBASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smg1Q8BKX6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.81□□□□□ -0.36
Smg1Q8BKX6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smg1Q8BKX6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Gm18624-201ENSMUST00000220966 658 ntBASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.8□□□□□ -0.36
Smg1Q8BKX6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Gm5566-201ENSMUST00000116118 459 ntBASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.8□□□□□ -0.36
Smg1Q8BKX6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.8□□□□□ -0.36
Smg1Q8BKX6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smg1Q8BKX6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Smg1Q8BKX6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smg1Q8BKX6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Smg1Q8BKX6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms