Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Gm11779-201ENSMUST00000118541 368 ntBASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim23Q8BGX0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim23Q8BGX0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim23Q8BGX0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim23Q8BGX0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim23Q8BGX0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms