Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Gm13884-201ENSMUST00000118103 829 ntBASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Samm50Q8BGH2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.46
Samm50Q8BGH2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Samm50Q8BGH2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Mzt1-203ENSMUST00000227948 952 ntBASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Samm50Q8BGH2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Mir6404-201ENSMUST00000183699 94 ntBASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Samm50Q8BGH2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Gm25406-201ENSMUST00000157599 105 ntBASIC17.93■□□□□ 0.46
Samm50Q8BGH2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Rps4l-201ENSMUST00000071745 943 ntBASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Samm50Q8BGH2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Gm6376-201ENSMUST00000209407 580 ntBASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Gm9172-201ENSMUST00000212092 954 ntBASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms