Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Shd-206ENSMUST00000225145 998 ntBASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trnp1Q80ZI1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Asic1-205ENSMUST00000228185 1818 ntBASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Gm6745-201ENSMUST00000199216 526 ntBASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trnp1Q80ZI1 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Gm6912-201ENSMUST00000117218 544 ntBASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Gm8515-201ENSMUST00000194852 576 ntBASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Gm6180-201ENSMUST00000065243 498 ntBASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trnp1Q80ZI1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Gm23984-201ENSMUST00000157139 203 ntBASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trnp1Q80ZI1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trnp1Q80ZI1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms