Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Gm29667-201ENSMUST00000190817 490 ntBASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Rpap1Q80TE0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Gm9719-201ENSMUST00000162765 543 ntBASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC23.51■■□□□ 1.35
Rpap1Q80TE0 Gm24543-201ENSMUST00000103867 82 ntBASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Gm15222-202ENSMUST00000228667 1726 ntBASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rpap1Q80TE0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Gm18187-201ENSMUST00000196476 984 ntBASIC23.49■■□□□ 1.35
Rpap1Q80TE0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rpap1Q80TE0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Gm5357-201ENSMUST00000212720 1924 ntBASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Shd-206ENSMUST00000225145 998 ntBASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Celf4-206ENSMUST00000224553 1729 ntBASIC23.48■■□□□ 1.35
Rpap1Q80TE0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC23.48■■□□□ 1.35
Rpap1Q80TE0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rpap1Q80TE0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms