Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Gm16215-201ENSMUST00000161990 637 ntBASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx55Q6ZPL9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx55Q6ZPL9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ddx55Q6ZPL9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.33■□□□□ 0.37
Ddx55Q6ZPL9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx55Q6ZPL9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Ddx55Q6ZPL9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Syt7-204ENSMUST00000223586 1344 ntBASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Gm43767-201ENSMUST00000198933 381 ntBASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Gm44855-201ENSMUST00000205725 362 ntBASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx55Q6ZPL9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Gm44344-201ENSMUST00000200287 129 ntBASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Syt7-205ENSMUST00000224135 1557 ntBASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx55Q6ZPL9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Gm27838-201ENSMUST00000184829 128 ntBASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.31■□□□□ 0.36
Ddx55Q6ZPL9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms