Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Gm27430-201ENSMUST00000184585 107 ntBASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Gm44333-201ENSMUST00000197168 107 ntBASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nup98Q6PFD9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nup98Q6PFD9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Gm9719-201ENSMUST00000162765 543 ntBASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Mir7684-201ENSMUST00000183858 60 ntBASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Gm27306-201ENSMUST00000183970 107 ntBASIC17.84■□□□□ 0.45
Nup98Q6PFD9 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nup98Q6PFD9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nup98Q6PFD9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.45
Nup98Q6PFD9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nup98Q6PFD9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.83■□□□□ 0.45
Nup98Q6PFD9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nup98Q6PFD9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nup98Q6PFD9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nup98Q6PFD9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nup98Q6PFD9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Gm25144-201ENSMUST00000179561 110 ntBASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Gm25352-201ENSMUST00000179815 110 ntBASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Gm27533-201ENSMUST00000183800 152 ntBASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Dupd1-202ENSMUST00000224735 548 ntBASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Nup98Q6PFD9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Gm12151-201ENSMUST00000121374 290 ntBASIC17.82■□□□□ 0.44
Nup98Q6PFD9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms