Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf220Q6PDX6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Gm22240-201ENSMUST00000175225 82 ntBASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Gm18115-201ENSMUST00000221209 621 ntBASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf220Q6PDX6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf220Q6PDX6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf220Q6PDX6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf220Q6PDX6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms