Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Herc4Q6PAV2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Gm10060-201ENSMUST00000212002 111 ntBASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Herc4Q6PAV2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Gm5682-201ENSMUST00000173402 505 ntBASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Gm6550-201ENSMUST00000187574 993 ntBASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Herc4Q6PAV2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Herc4Q6PAV2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Herc4Q6PAV2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Herc4Q6PAV2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Gm27741-201ENSMUST00000185060 237 ntBASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Gm37153-201ENSMUST00000193637 231 ntBASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.89■□□□□ 0.29
Herc4Q6PAV2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms