Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.17■□□□□ 0.34
Abcf1Q6P542 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.17■□□□□ 0.34
Abcf1Q6P542 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.17■□□□□ 0.34
Abcf1Q6P542 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Abcf1Q6P542 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.16■□□□□ 0.34
Abcf1Q6P542 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcf1Q6P542 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Gm13312-201ENSMUST00000119631 718 ntBASIC17.15■□□□□ 0.34
Abcf1Q6P542 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.15■□□□□ 0.34
Abcf1Q6P542 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcf1Q6P542 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Abcf1Q6P542 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.34
Abcf1Q6P542 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Gm19891-201ENSMUST00000189771 303 ntBASIC17.14■□□□□ 0.33
Abcf1Q6P542 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.14■□□□□ 0.33
Abcf1Q6P542 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms