Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Gm7222-201ENSMUST00000117512 906 ntBASIC15.52■□□□□ 0.08
Casc4Q6P2L7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Casc4Q6P2L7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Casc4Q6P2L7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Gm15358-201ENSMUST00000119249 520 ntBASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Casc4Q6P2L7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Gm6550-201ENSMUST00000187574 993 ntBASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Casc4Q6P2L7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gm18733-201ENSMUST00000173950 856 ntBASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gm2651-201ENSMUST00000203560 838 ntBASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Casc4Q6P2L7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms