Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.29□□□□□ -0.6
Foxc1Q61572 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxc1Q61572 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.28□□□□□ -0.6
Foxc1Q61572 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm12813-201ENSMUST00000119615 902 ntBASIC11.28□□□□□ -0.6
Foxc1Q61572 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm6257-201ENSMUST00000163864 910 ntBASIC11.28□□□□□ -0.6
Foxc1Q61572 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.28□□□□□ -0.6
Foxc1Q61572 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.28□□□□□ -0.6
Foxc1Q61572 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Foxc1Q61572 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.28□□□□□ -0.6
Foxc1Q61572 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.28□□□□□ -0.6
Foxc1Q61572 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
Foxc1Q61572 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Foxc1Q61572 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Foxc1Q61572 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Foxc1Q61572 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Foxc1Q61572 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Foxc1Q61572 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Foxc1Q61572 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.27□□□□□ -0.6
Foxc1Q61572 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Foxc1Q61572 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm4459-201ENSMUST00000118750 468 ntBASIC11.27□□□□□ -0.61
Foxc1Q61572 Mir5131-201ENSMUST00000175426 93 ntBASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm7506-201ENSMUST00000207758 815 ntBASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm44953-201ENSMUST00000208745 1286 ntBASIC11.27□□□□□ -0.61
Foxc1Q61572 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.27□□□□□ -0.61
Foxc1Q61572 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Foxc1Q61572 AC155266.1-201ENSMUST00000220762 904 ntBASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm8655-201ENSMUST00000221159 852 ntBASIC11.27□□□□□ -0.61
Foxc1Q61572 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Foxc1Q61572 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Foxc1Q61572 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms