Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptch1Q61115 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ptch1Q61115 Gm12960-201ENSMUST00000120017 1066 ntBASIC21.8■■□□□ 1.08
Ptch1Q61115 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC21.8■■□□□ 1.08
Ptch1Q61115 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ptch1Q61115 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ptch1Q61115 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC21.8■■□□□ 1.08
Ptch1Q61115 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC21.8■■□□□ 1.08
Ptch1Q61115 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC21.8■■□□□ 1.08
Ptch1Q61115 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC21.8■■□□□ 1.08
Ptch1Q61115 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ptch1Q61115 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptch1Q61115 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptch1Q61115 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
Ptch1Q61115 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ptch1Q61115 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptch1Q61115 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21.79■■□□□ 1.08
Ptch1Q61115 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptch1Q61115 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC21.79■■□□□ 1.08
Ptch1Q61115 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ptch1Q61115 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC21.79■■□□□ 1.08
Ptch1Q61115 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptch1Q61115 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ptch1Q61115 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptch1Q61115 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ptch1Q61115 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC21.78■■□□□ 1.08
Ptch1Q61115 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Ptch1Q61115 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Ldha-ps-201ENSMUST00000119390 995 ntBASIC21.78■■□□□ 1.08
Ptch1Q61115 Gm7820-201ENSMUST00000121012 1052 ntBASIC21.78■■□□□ 1.08
Ptch1Q61115 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC21.78■■□□□ 1.08
Ptch1Q61115 Gm45453-201ENSMUST00000211758 853 ntBASIC21.78■■□□□ 1.08
Ptch1Q61115 Gm9229-201ENSMUST00000222777 126 ntBASIC21.78■■□□□ 1.08
Ptch1Q61115 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ptch1Q61115 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptch1Q61115 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Ptch1Q61115 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptch1Q61115 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptch1Q61115 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptch1Q61115 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptch1Q61115 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
Ptch1Q61115 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC21.77■■□□□ 1.08
Ptch1Q61115 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
Ptch1Q61115 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC21.77■■□□□ 1.08
Ptch1Q61115 AC155286.1-201ENSMUST00000218632 448 ntBASIC21.77■■□□□ 1.08
Ptch1Q61115 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ptch1Q61115 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptch1Q61115 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptch1Q61115 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ptch1Q61115 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ptch1Q61115 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.77■■□□□ 1.07
Ptch1Q61115 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC21.76■■□□□ 1.07
Ptch1Q61115 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Gm45331-201ENSMUST00000209868 554 ntBASIC21.76■■□□□ 1.07
Ptch1Q61115 AC156016.3-201ENSMUST00000228623 344 ntBASIC21.76■■□□□ 1.07
Ptch1Q61115 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptch1Q61115 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC21.75■■□□□ 1.07
Ptch1Q61115 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC21.75■■□□□ 1.07
Ptch1Q61115 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Ptch1Q61115 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC21.75■■□□□ 1.07
Ptch1Q61115 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Mir6392-201ENSMUST00000184924 108 ntBASIC21.75■■□□□ 1.07
Ptch1Q61115 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms