Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.35■□□□□ 0.53
Vps54Q5SPW0 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps54Q5SPW0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Mir3113-201ENSMUST00000175478 76 ntBASIC18.34■□□□□ 0.53
Vps54Q5SPW0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps54Q5SPW0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps54Q5SPW0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps54Q5SPW0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps54Q5SPW0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Vps54Q5SPW0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps54Q5SPW0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps54Q5SPW0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps54Q5SPW0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.33■□□□□ 0.52
Vps54Q5SPW0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps54Q5SPW0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Gm25911-201ENSMUST00000157621 56 ntBASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Gm5177-201ENSMUST00000183092 997 ntBASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Gm45747-201ENSMUST00000212203 999 ntBASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps54Q5SPW0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps54Q5SPW0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms