Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5d-4Q5R1F6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav5d-4Q5R1F6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5d-4Q5R1F6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms