Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ckap2Q3V1H1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ckap2Q3V1H1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Psmb5-202ENSMUST00000227257 622 ntBASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ckap2Q3V1H1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap2Q3V1H1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap2Q3V1H1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap2Q3V1H1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap2Q3V1H1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ckap2Q3V1H1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Gm1401-201ENSMUST00000122048 772 ntBASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ckap2Q3V1H1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap2Q3V1H1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap2Q3V1H1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap2Q3V1H1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap2Q3V1H1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap2Q3V1H1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ckap2Q3V1H1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms