Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx6-3Q3UHX8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Gm44492-201ENSMUST00000197012 141 ntBASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Thap2-203ENSMUST00000218989 527 ntBASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx6-3Q3UHX8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Gm37935-201ENSMUST00000192012 982 ntBASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkx6-3Q3UHX8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.4□□□□□ -0.11
Nkx6-3Q3UHX8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nkx6-3Q3UHX8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkx6-3Q3UHX8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms