Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm12008-201ENSMUST00000117791 755 ntBASIC13.29□□□□□ -0.28
Q3U1D9 Gm11025-201ENSMUST00000140773 466 ntBASIC13.29□□□□□ -0.28
Q3U1D9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.29□□□□□ -0.28
Q3U1D9 Gm10499-201ENSMUST00000174094 934 ntBASIC13.29□□□□□ -0.28
Q3U1D9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Q3U1D9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.29□□□□□ -0.28
Q3U1D9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.29□□□□□ -0.28
Q3U1D9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.29□□□□□ -0.28
Q3U1D9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.29□□□□□ -0.28
Q3U1D9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Q3U1D9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.29□□□□□ -0.28
Q3U1D9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Q3U1D9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.28□□□□□ -0.28
Q3U1D9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.28□□□□□ -0.28
Q3U1D9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Q3U1D9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Q3U1D9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Q3U1D9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Gm15427-201ENSMUST00000117288 531 ntBASIC13.28□□□□□ -0.28
Q3U1D9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.28□□□□□ -0.28
Q3U1D9 Mir1895-201ENSMUST00000122615 79 ntBASIC13.28□□□□□ -0.28
Q3U1D9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.28□□□□□ -0.28
Q3U1D9 Gm17968-201ENSMUST00000194902 784 ntBASIC13.28□□□□□ -0.28
Q3U1D9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.28□□□□□ -0.28
Q3U1D9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Q3U1D9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Q3U1D9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Q3U1D9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.28□□□□□ -0.28
Q3U1D9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.28□□□□□ -0.28
Q3U1D9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Q3U1D9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Q3U1D9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Q3U1D9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.27□□□□□ -0.29
Q3U1D9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.27□□□□□ -0.29
Q3U1D9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Q3U1D9 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.27□□□□□ -0.29
Q3U1D9 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.27□□□□□ -0.29
Q3U1D9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Q3U1D9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Q3U1D9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Q3U1D9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.27□□□□□ -0.29
Q3U1D9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.27□□□□□ -0.29
Q3U1D9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.27□□□□□ -0.29
Q3U1D9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.27□□□□□ -0.29
Q3U1D9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.27□□□□□ -0.29
Q3U1D9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Q3U1D9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Q3U1D9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Q3U1D9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms