Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptchd3Q0EEE2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Ptchd3Q0EEE2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ptchd3Q0EEE2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
Ptchd3Q0EEE2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ptchd3Q0EEE2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ptchd3Q0EEE2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ptchd3Q0EEE2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ptchd3Q0EEE2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Gm45328-201ENSMUST00000210942 917 ntBASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ptchd3Q0EEE2 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ptchd3Q0EEE2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms