Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm27839-201ENSMUST00000184242 106 ntBASIC13.59□□□□□ -0.23
Chd8Q09XV5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.59□□□□□ -0.23
Chd8Q09XV5 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Gm27486-201ENSMUST00000184923 80 ntBASIC13.59□□□□□ -0.23
Chd8Q09XV5 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chd8Q09XV5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Chd8Q09XV5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd8Q09XV5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Chd8Q09XV5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd8Q09XV5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Chd8Q09XV5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Gm43758-201ENSMUST00000199500 367 ntBASIC13.58□□□□□ -0.24
Chd8Q09XV5 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Gm10012-201ENSMUST00000078252 192 ntBASIC13.58□□□□□ -0.24
Chd8Q09XV5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.58□□□□□ -0.24
Chd8Q09XV5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Gm45880-201ENSMUST00000213041 853 ntBASIC13.58□□□□□ -0.24
Chd8Q09XV5 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chd8Q09XV5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chd8Q09XV5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.57□□□□□ -0.24
Chd8Q09XV5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.57□□□□□ -0.24
Chd8Q09XV5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.57□□□□□ -0.24
Chd8Q09XV5 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.57□□□□□ -0.24
Chd8Q09XV5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chd8Q09XV5 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.57□□□□□ -0.24
Chd8Q09XV5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.57□□□□□ -0.24
Chd8Q09XV5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Gm43118-201ENSMUST00000199149 775 ntBASIC13.57□□□□□ -0.24
Chd8Q09XV5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chd8Q09XV5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.56□□□□□ -0.24
Chd8Q09XV5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms