Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.75□□□□□ -0.37
Tff1Q08423 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.75□□□□□ -0.37
Tff1Q08423 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.75□□□□□ -0.37
Tff1Q08423 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.75□□□□□ -0.37
Tff1Q08423 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tff1Q08423 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tff1Q08423 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Tff1Q08423 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.74□□□□□ -0.37
Tff1Q08423 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tff1Q08423 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Tff1Q08423 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Gm15794-201ENSMUST00000120182 631 ntBASIC12.74□□□□□ -0.37
Tff1Q08423 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.74□□□□□ -0.37
Tff1Q08423 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tff1Q08423 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tff1Q08423 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tff1Q08423 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tff1Q08423 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.73□□□□□ -0.37
Tff1Q08423 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.73□□□□□ -0.37
Tff1Q08423 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.73□□□□□ -0.37
Tff1Q08423 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.73□□□□□ -0.37
Tff1Q08423 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tff1Q08423 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.73□□□□□ -0.37
Tff1Q08423 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.73□□□□□ -0.37
Tff1Q08423 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.73□□□□□ -0.37
Tff1Q08423 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tff1Q08423 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tff1Q08423 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Tff1Q08423 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.72□□□□□ -0.37
Tff1Q08423 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Mir6404-201ENSMUST00000183699 94 ntBASIC12.72□□□□□ -0.37
Tff1Q08423 Gm37935-201ENSMUST00000192012 982 ntBASIC12.72□□□□□ -0.37
Tff1Q08423 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.72□□□□□ -0.37
Tff1Q08423 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.72□□□□□ -0.37
Tff1Q08423 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tff1Q08423 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.72□□□□□ -0.37
Tff1Q08423 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tff1Q08423 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms