Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Shox2P70390 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Shox2P70390 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.17■□□□□ 0.02
Shox2P70390 Gm14722-201ENSMUST00000118943 689 ntBASIC15.17■□□□□ 0.02
Shox2P70390 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.17■□□□□ 0.02
Shox2P70390 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.17■□□□□ 0.02
Shox2P70390 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.17■□□□□ 0.02
Shox2P70390 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.17■□□□□ 0.02
Shox2P70390 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.17■□□□□ 0.02
Shox2P70390 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Shox2P70390 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Shox2P70390 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Shox2P70390 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.17■□□□□ 0.02
Shox2P70390 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Shox2P70390 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Shox2P70390 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Shox2P70390 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Shox2P70390 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Shox2P70390 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.16■□□□□ 0.02
Shox2P70390 Gm37856-201ENSMUST00000191634 999 ntBASIC15.16■□□□□ 0.02
Shox2P70390 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.16■□□□□ 0.02
Shox2P70390 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.16■□□□□ 0.02
Shox2P70390 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.16■□□□□ 0.02
Shox2P70390 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.16■□□□□ 0.02
Shox2P70390 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Shox2P70390 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Shox2P70390 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Shox2P70390 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.15■□□□□ 0.02
Shox2P70390 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.15■□□□□ 0.02
Shox2P70390 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.15■□□□□ 0.02
Shox2P70390 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.15■□□□□ 0.02
Shox2P70390 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.15■□□□□ 0.02
Shox2P70390 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Shox2P70390 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Shox2P70390 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.15■□□□□ 0.02
Shox2P70390 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Shox2P70390 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Shox2P70390 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shox2P70390 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shox2P70390 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shox2P70390 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Shox2P70390 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shox2P70390 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.14■□□□□ 0.01
Shox2P70390 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shox2P70390 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.14■□□□□ 0.01
Shox2P70390 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shox2P70390 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms