Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Lmo4P61969 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lmo4P61969 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Gm22065-201ENSMUST00000103753 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm22066-201ENSMUST00000103761 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm24932-201ENSMUST00000103763 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm24115-201ENSMUST00000103799 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm22190-201ENSMUST00000103827 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm22191-201ENSMUST00000103831 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm24721-201ENSMUST00000103849 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm28018-201ENSMUST00000103869 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm26399-201ENSMUST00000103937 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.33□□□□□ -0.44
Lmo4P61969 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.33□□□□□ -0.44
Lmo4P61969 Gm25349-201ENSMUST00000177728 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm23616-201ENSMUST00000177797 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm25871-201ENSMUST00000177816 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm24752-201ENSMUST00000178240 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm24496-201ENSMUST00000178287 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm25649-201ENSMUST00000178476 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm25548-201ENSMUST00000178681 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm23147-201ENSMUST00000178841 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm26095-201ENSMUST00000179270 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm22171-201ENSMUST00000179283 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm23936-201ENSMUST00000179354 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm22619-201ENSMUST00000179516 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm25255-201ENSMUST00000179579 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm24755-201ENSMUST00000179691 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm26506-201ENSMUST00000179692 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm25086-201ENSMUST00000179931 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm23243-201ENSMUST00000180047 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm24659-201ENSMUST00000180212 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm24169-201ENSMUST00000180244 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm23689-201ENSMUST00000180354 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm27359-201ENSMUST00000184153 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm27785-201ENSMUST00000184268 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm27466-201ENSMUST00000184396 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm27703-201ENSMUST00000184836 110 ntBASIC12.33□□□□□ -0.44
Lmo4P61969 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lmo4P61969 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lmo4P61969 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lmo4P61969 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lmo4P61969 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lmo4P61969 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Gm25287-201ENSMUST00000103846 110 ntBASIC12.32□□□□□ -0.44
Lmo4P61969 Gm22918-201ENSMUST00000103855 110 ntBASIC12.32□□□□□ -0.44
Lmo4P61969 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.32□□□□□ -0.44
Lmo4P61969 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.32□□□□□ -0.44
Lmo4P61969 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.32□□□□□ -0.44
Lmo4P61969 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.32□□□□□ -0.44
Lmo4P61969 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.32□□□□□ -0.44
Lmo4P61969 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.32□□□□□ -0.44
Lmo4P61969 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms