Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.47□□□□□ -0.09
Nup43P59235 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nup43P59235 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup43P59235 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.46□□□□□ -0.09
Nup43P59235 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup43P59235 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.46□□□□□ -0.09
Nup43P59235 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.46□□□□□ -0.09
Nup43P59235 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.46□□□□□ -0.09
Nup43P59235 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nup43P59235 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Nup43P59235 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nup43P59235 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Nup43P59235 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup43P59235 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup43P59235 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nup43P59235 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Nup43P59235 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Nup43P59235 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Nup43P59235 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup43P59235 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup43P59235 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup43P59235 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.45□□□□□ -0.1
Nup43P59235 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup43P59235 Gm27628-201ENSMUST00000184911 107 ntBASIC14.45□□□□□ -0.1
Nup43P59235 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.45□□□□□ -0.1
Nup43P59235 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nup43P59235 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.45□□□□□ -0.1
Nup43P59235 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup43P59235 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup43P59235 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup43P59235 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nup43P59235 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup43P59235 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup43P59235 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup43P59235 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.44□□□□□ -0.1
Nup43P59235 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.44□□□□□ -0.1
Nup43P59235 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nup43P59235 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup43P59235 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup43P59235 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms