Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nub1P54729 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.47■□□□□ 0.23
Nub1P54729 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nub1P54729 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.47■□□□□ 0.23
Nub1P54729 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.47■□□□□ 0.23
Nub1P54729 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.47■□□□□ 0.23
Nub1P54729 Gm18195-201ENSMUST00000207604 706 ntBASIC16.47■□□□□ 0.23
Nub1P54729 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nub1P54729 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Nub1P54729 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nub1P54729 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nub1P54729 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nub1P54729 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.46■□□□□ 0.23
Nub1P54729 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.46■□□□□ 0.23
Nub1P54729 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nub1P54729 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nub1P54729 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nub1P54729 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Nub1P54729 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nub1P54729 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nub1P54729 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nub1P54729 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nub1P54729 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nub1P54729 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Nub1P54729 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
Nub1P54729 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
Nub1P54729 AV026068-213ENSMUST00000223675 1171 ntBASIC16.45■□□□□ 0.22
Nub1P54729 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.45■□□□□ 0.22
Nub1P54729 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.45■□□□□ 0.22
Nub1P54729 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.45■□□□□ 0.22
Nub1P54729 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.45■□□□□ 0.22
Nub1P54729 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.45■□□□□ 0.22
Nub1P54729 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nub1P54729 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Nub1P54729 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Nub1P54729 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.44■□□□□ 0.22
Nub1P54729 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.44■□□□□ 0.22
Nub1P54729 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nub1P54729 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms