Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.81■□□□□ 0.44
Cacnb3P54285 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.81■□□□□ 0.44
Cacnb3P54285 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.81■□□□□ 0.44
Cacnb3P54285 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cacnb3P54285 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacnb3P54285 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cacnb3P54285 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cacnb3P54285 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.8■□□□□ 0.44
Cacnb3P54285 Gm27430-201ENSMUST00000184585 107 ntBASIC17.8■□□□□ 0.44
Cacnb3P54285 Gm44333-201ENSMUST00000197168 107 ntBASIC17.8■□□□□ 0.44
Cacnb3P54285 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.8■□□□□ 0.44
Cacnb3P54285 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.8■□□□□ 0.44
Cacnb3P54285 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacnb3P54285 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cacnb3P54285 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.8■□□□□ 0.44
Cacnb3P54285 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cacnb3P54285 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cacnb3P54285 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cacnb3P54285 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Gm25287-201ENSMUST00000103846 110 ntBASIC17.79■□□□□ 0.44
Cacnb3P54285 Gm22918-201ENSMUST00000103855 110 ntBASIC17.79■□□□□ 0.44
Cacnb3P54285 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.79■□□□□ 0.44
Cacnb3P54285 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.79■□□□□ 0.44
Cacnb3P54285 Gm15483-201ENSMUST00000120338 456 ntBASIC17.79■□□□□ 0.44
Cacnb3P54285 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.79■□□□□ 0.44
Cacnb3P54285 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cacnb3P54285 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.79■□□□□ 0.44
Cacnb3P54285 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacnb3P54285 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cacnb3P54285 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacnb3P54285 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
Cacnb3P54285 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cacnb3P54285 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacnb3P54285 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cacnb3P54285 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacnb3P54285 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cacnb3P54285 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.77■□□□□ 0.44
Cacnb3P54285 Gm13223-201ENSMUST00000118609 747 ntBASIC17.77■□□□□ 0.44
Cacnb3P54285 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.77■□□□□ 0.44
Cacnb3P54285 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cacnb3P54285 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cacnb3P54285 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
Cacnb3P54285 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.77■□□□□ 0.44
Cacnb3P54285 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.77■□□□□ 0.44
Cacnb3P54285 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.77■□□□□ 0.44
Cacnb3P54285 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms