Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SqleP52019 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.55■□□□□ 0.24
SqleP52019 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
SqleP52019 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SqleP52019 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.55■□□□□ 0.24
SqleP52019 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.55■□□□□ 0.24
SqleP52019 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SqleP52019 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SqleP52019 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.55■□□□□ 0.24
SqleP52019 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SqleP52019 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SqleP52019 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SqleP52019 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SqleP52019 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.54■□□□□ 0.24
SqleP52019 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.54■□□□□ 0.24
SqleP52019 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SqleP52019 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SqleP52019 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SqleP52019 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.54■□□□□ 0.24
SqleP52019 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.54■□□□□ 0.24
SqleP52019 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.54■□□□□ 0.24
SqleP52019 Gm6266-201ENSMUST00000203844 806 ntBASIC16.54■□□□□ 0.24
SqleP52019 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.54■□□□□ 0.24
SqleP52019 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.54■□□□□ 0.24
SqleP52019 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.54■□□□□ 0.24
SqleP52019 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SqleP52019 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.54■□□□□ 0.24
SqleP52019 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SqleP52019 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SqleP52019 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.53■□□□□ 0.24
SqleP52019 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Gm24543-201ENSMUST00000103867 82 ntBASIC16.53■□□□□ 0.24
SqleP52019 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.53■□□□□ 0.24
SqleP52019 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SqleP52019 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.53■□□□□ 0.24
SqleP52019 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SqleP52019 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.53■□□□□ 0.24
SqleP52019 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
SqleP52019 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.53■□□□□ 0.24
SqleP52019 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SqleP52019 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SqleP52019 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.52■□□□□ 0.24
SqleP52019 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.52■□□□□ 0.24
SqleP52019 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.52■□□□□ 0.24
SqleP52019 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SqleP52019 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms