Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HttP42859 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HttP42859 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
HttP42859 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.12■□□□□ 0.17
HttP42859 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HttP42859 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.12■□□□□ 0.17
HttP42859 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.12■□□□□ 0.17
HttP42859 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Gm8969-201ENSMUST00000199694 526 ntBASIC16.12■□□□□ 0.17
HttP42859 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.12■□□□□ 0.17
HttP42859 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HttP42859 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HttP42859 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.12■□□□□ 0.17
HttP42859 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.12■□□□□ 0.17
HttP42859 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HttP42859 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.11■□□□□ 0.17
HttP42859 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.11■□□□□ 0.17
HttP42859 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
HttP42859 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.11■□□□□ 0.17
HttP42859 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.11■□□□□ 0.17
HttP42859 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.11■□□□□ 0.17
HttP42859 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.11■□□□□ 0.17
HttP42859 Gm2495-201ENSMUST00000191160 466 ntBASIC16.11■□□□□ 0.17
HttP42859 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HttP42859 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Gm28911-201ENSMUST00000188837 117 ntBASIC16.1■□□□□ 0.17
HttP42859 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.1■□□□□ 0.17
HttP42859 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HttP42859 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HttP42859 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
HttP42859 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HttP42859 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HttP42859 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
HttP42859 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HttP42859 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.09■□□□□ 0.17
HttP42859 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
HttP42859 Mir6392-201ENSMUST00000184924 108 ntBASIC16.09■□□□□ 0.17
HttP42859 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.09■□□□□ 0.17
HttP42859 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HttP42859 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
HttP42859 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HttP42859 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HttP42859 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
HttP42859 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HttP42859 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HttP42859 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
HttP42859 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HttP42859 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HttP42859 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Gm14722-201ENSMUST00000118943 689 ntBASIC16.08■□□□□ 0.16
HttP42859 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HttP42859 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms