Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc6a13P31649 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.53■□□□□ 0.08
Slc6a13P31649 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc6a13P31649 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.53■□□□□ 0.08
Slc6a13P31649 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.53■□□□□ 0.08
Slc6a13P31649 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.53■□□□□ 0.08
Slc6a13P31649 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.53■□□□□ 0.08
Slc6a13P31649 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc6a13P31649 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.53■□□□□ 0.08
Slc6a13P31649 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc6a13P31649 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Slc6a13P31649 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.53■□□□□ 0.08
Slc6a13P31649 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a13P31649 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a13P31649 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.52■□□□□ 0.08
Slc6a13P31649 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.52■□□□□ 0.08
Slc6a13P31649 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a13P31649 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a13P31649 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a13P31649 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Slc6a13P31649 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.52■□□□□ 0.08
Slc6a13P31649 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Slc6a13P31649 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.52■□□□□ 0.08
Slc6a13P31649 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a13P31649 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Slc6a13P31649 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc6a13P31649 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Slc6a13P31649 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Slc6a13P31649 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Slc6a13P31649 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a13P31649 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.52■□□□□ 0.07
Slc6a13P31649 Sybu-209ENSMUST00000228639 4113 ntBASIC15.52■□□□□ 0.07
Slc6a13P31649 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a13P31649 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a13P31649 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a13P31649 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Slc6a13P31649 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc6a13P31649 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.51■□□□□ 0.07
Slc6a13P31649 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Slc6a13P31649 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Slc6a13P31649 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Slc6a13P31649 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.51■□□□□ 0.07
Slc6a13P31649 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.51■□□□□ 0.07
Slc6a13P31649 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.51■□□□□ 0.07
Slc6a13P31649 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
Slc6a13P31649 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc6a13P31649 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.5■□□□□ 0.07
Slc6a13P31649 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.5■□□□□ 0.07
Slc6a13P31649 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Slc6a13P31649 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.5■□□□□ 0.07
Slc6a13P31649 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Slc6a13P31649 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.5■□□□□ 0.07
Slc6a13P31649 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.5■□□□□ 0.07
Slc6a13P31649 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc6a13P31649 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms