Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfrsf1aP25118 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Gm27357-201ENSMUST00000183754 135 ntBASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfrsf1aP25118 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gm8344-201ENSMUST00000119813 856 ntBASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gm15372-201ENSMUST00000120729 834 ntBASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tnfrsf1aP25118 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfrsf1aP25118 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Tnfrsf1aP25118 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.83□□□□□ -0.35
Tnfrsf1aP25118 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Tnfrsf1aP25118 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Gm4459-201ENSMUST00000118750 468 ntBASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Gm18622-201ENSMUST00000219361 595 ntBASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms