Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Gm11780-201ENSMUST00000136880 516 ntBASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.54□□□□□ -0.4
Tnfrsf9P20334 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Gm10175-201ENSMUST00000086013 645 ntBASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tnfrsf9P20334 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.53□□□□□ -0.4
Tnfrsf9P20334 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tnfrsf9P20334 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Tnfrsf9P20334 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Mir3113-201ENSMUST00000175478 76 ntBASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tnfrsf9P20334 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms