Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rb1P13405 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rb1P13405 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.68■□□□□ 0.1
Rb1P13405 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Rb1P13405 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rb1P13405 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rb1P13405 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.67■□□□□ 0.1
Rb1P13405 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.67■□□□□ 0.1
Rb1P13405 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.67■□□□□ 0.1
Rb1P13405 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rb1P13405 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Gm14822-201ENSMUST00000122247 291 ntBASIC15.67■□□□□ 0.1
Rb1P13405 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rb1P13405 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.67■□□□□ 0.1
Rb1P13405 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.67■□□□□ 0.1
Rb1P13405 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.67■□□□□ 0.1
Rb1P13405 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.67■□□□□ 0.1
Rb1P13405 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rb1P13405 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rb1P13405 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.66■□□□□ 0.1
Rb1P13405 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.66■□□□□ 0.1
Rb1P13405 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.66■□□□□ 0.1
Rb1P13405 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.66■□□□□ 0.1
Rb1P13405 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.66■□□□□ 0.1
Rb1P13405 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.66■□□□□ 0.1
Rb1P13405 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Rb1P13405 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.66■□□□□ 0.1
Rb1P13405 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rb1P13405 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rb1P13405 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rb1P13405 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.65■□□□□ 0.1
Rb1P13405 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.65■□□□□ 0.1
Rb1P13405 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.65■□□□□ 0.1
Rb1P13405 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.65■□□□□ 0.1
Rb1P13405 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.65■□□□□ 0.1
Rb1P13405 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rb1P13405 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.64■□□□□ 0.1
Rb1P13405 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rb1P13405 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rb1P13405 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rb1P13405 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Rb1P13405 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rb1P13405 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rb1P13405 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms