Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp6P0C0A3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Gm8344-201ENSMUST00000119813 856 ntBASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp6P0C0A3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Gm6089-201ENSMUST00000197666 938 ntBASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Gm10060-201ENSMUST00000212002 111 ntBASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
Chmp6P0C0A3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp6P0C0A3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp6P0C0A3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms